Saturday, November 18, 2017

November 18, 2017 Saturday

Bedtime Story 


The Three Papers of 2005

 
Before we move on, I wish to briefly go through the three publications that came out in 2005 and were nearly identical in their basic premises.

I am doing this so that we get a feel of them.

The first of these three papers was published in the February month of 2005 in the Journal of Molecular Evolution by the team of Francisco Mojica titled “Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements”.

We had seen earlier how pitifully Mojica had struggled to get this paper published.

In the abstract of the paper, it states:

“Here we show that CRISPR spaces derive from preexisting sequences, either chromosomal or within transmissible genetic elements such as bacteriophages and conjugative plasmids.

Remarkably, these extrachromosomal elements fail to infect the specific spacer-carrier strain, implying a relationship between CRISPR and immunity against targeted DNA.”

These are bold statements indeed made for the first time with accompanying experimental evidence.

After reading these crucial lines of the abstract of the paper it makes complete sense why Mojica was in a hurry to publish.

He knew that it would not be too far when other labs would very soon make the connection.

The fear of getting scooped by others was real and would be tragic in this case as it was a project that he had been pursuing for more than a decade.

He was absolutely right as the next paper was published just next month in March 2005 in the journal Microbiology.

He had by a whisker made himself to be the first to report.

The second paper was authored by Pourcel C, Salvignol G and Vergnaud G. and the paper was titled “CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.”

This paper and its team have a fascinating story to tell of their own.

This second paper came not from any university but from a unit of the French Ministry of Defense located 30 miles south of Paris.

Gilles Vergnaud was a protégé of the French Army, the Direction Générale de l’Armement.

He was not a soldier in a conventional sense, having got his training in human genetics from Institut Pasteur and then getting support for his doctoral and post doctoral studies from the defense establishment.

In 1987 when he finally completed his studies nearly totally funded by the government, it was time for payback.

And yes, like many others he did not fly away to the United States or the Great Britain where most likely he would have got better offers.

Stay tuned to the voice of an average story storytelling chimpanzee or login at http://panarrans.blogspot.com
                              
Good night mon ami and my fellow cousin ape.
                           
  
                

             












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Another great educator and a teacher that I am aware of is Professor Subhashish Chattopadhyay in Bangalore, India.

While I narrate stories, Professor Subhashish an electronic engineer and a former professor at BARC, does and teaches real mathematics and physics.

He started the participation of Indian students at the International Physics Olympiad.

Do visit him here:


All his books can be downloaded for free through this link:


For edutainment and English education of your children, I recommend this large collection of Halloween Songs for Kids:



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