Wednesday, July 31, 2019


July 31, 2019 Wednesday

Bedtime Story 


Claude Bernard and Science


If Bernard’s experiments which were primarily vivisections which in their very nature were shocking and ghastly then his thoughts on science were revolutionary for his times.

To him science was not about known but what was obscure and hidden.    

Any authority, whether scholarly or otherwise, ought to be taken with great skepticism and only experimental observation should be the leading authority.

“When we meet a fact which contradicts a prevailing theory, we must accept the fact and abandon the theory, even when they theory is supported by great names and generally accepted.”      

In his 1865 book ‘An Introduction to the Study of Experimental Medicine’ he describes the fundamental principles of scientific method, experimental medicine and objectivity in scientific observations that most doctors till date have not been able to grasp or understand or to come to terms with.

He was a true scientist who took nothing for granted, dismissed any old notions that did not have any experimental basis and relied only on experimentation.

When even today most people find it difficult to accept that there is nothing fundamentally different between a living and non-living object (except for the complexity of multi-layered organization) Bernard was prescient enough to proclaim that all living creatures were bound by the same laws as inanimate matter.           

He for one also was clear that science is a constant play between theory and fact and between induction and deduction.

While mathematics is purely deductive starting from axioms and postulates it is not the case with sciences specially biological and medical science.

Induction to him was reasoning from the particular to the general whereas deduction was reasoning from general to particular and they needed to go hand in hand.

It is crucial that any general theory that is arrived at by the method of observation and induction through a series of theoretical deductions must be tested by specifically designed experiments.

Only the outcome of the experiments can attest to the veracity of our proposed theories and if they do not pass the test of experiments the theories – even the fondest ones – would have to be abandoned.

Claude Bernard lived in the times of Michael Faraday and perhaps he was to physiology and medicine what Faraday was to the traditional hands-on physics.

Both were ardent experimentalists and perhaps for this reason one can him Bernard the “Faraday of physiology and medicine”.  

Bernard also emphasized that it was to the scientist to determine the causality of any natural phenomenon.

It is up to the scientist who has to find the link of a phenomenon to its immediate cause by first observing it carefully and then proposing a hypothesis.

Stay tuned to the voice of an average story storytelling chimpanzee or login at http://panarrans.blogspot.com
                              
Good night Mon Ami and my fellow cousin ape.
                           
  
                

                  












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Another great educator and a teacher that I am aware of is Professor Subhashish Chattopadhyay in Bangalore, India.

While I narrate stories, Professor Subhashish an electronic engineer and a former professor at BARC, does and teaches real mathematics and physics.

He started the participation of Indian students at the International Physics Olympiad.

Do visit him here:


All his books can be downloaded for free through this link:


For edutainment and English education of your children, I recommend this large collection of Halloween Songs for Kids:



Tuesday, July 30, 2019


July 30, 2019 Tuesday

Bedtime Story 


How to Reconcile with Anti-Speciesism and Meat Eating


Yet (in spite of total abhorrence for speciesism) in one of the interviews when Dawkins was asked whether he continues to eat meat, how did you think Dawkins replied?

How can I (and you) get out of this conundrum when I know that all the animal and plant species (one must not forget the plants in the zeal for more closely related large animal species) around me are my distant cousins who if we were to go long back enough we would end up reaching a stage where we shared a common ancestor or its siblings and still not exploit them?

Is it so that all our significant interactions with anybody are essentially exploitative and hardly ever equally reciprocal?

Are biological behaviors such as predation, grazing, parasitism, deception in mating and Batesian mimicry not examples of exploitative behavior?

Is it not natural for mega corporations, powerful companies and big builders to exploit abundant human resources if they are in plenty, weak and in need?

It seems that the strongest interaction between populations are those that enhance the fitness of individuals of one population (such as the predator, parasite, meat industry etc) while decreasing fitness of individuals in another population (the prey, host, poultry and cattle etc).

One must not make the mistake of seeing only predation as exploitative but also include among it herbivores and parasites just as transactions between mating partners and between parents and off springs are essentially exploitative.

In short, biological exploitation is all around us and no species or individual can hold his neck up and occupy a moral high ground.  

Perhaps this can justify Dawkins’ reply to the question of meat eating.

Dawkins reply on the conundrum of being a omnivore and anti-speciesist was as follows and it once again takes us back to the story of the American Civil War, the story of Trans Atlantic Slavery and the Southern booming cotton economy.

“It’s a little bit like the position which many people would have held a couple of hundred years ago over slavery.

Where lots of people felt morally uneasy about slavery but went along with it because the whole economy of the South depended upon Slavery.”

Compare and contrast these words with those of Claude Bernard nearly a century before those of Brigid Brophy the animal activist of England whose writing started the Oxford Group:

“The physiologist is no ordinary man.

He is a learned man, a man possessed and absorbed by a scientific idea.

He does not hear the animals’ cries of pain.

He is blind to the blood that flows.

He sees nothing but his idea, and organisms which conceal from him the secrets that he is resolved to discover.”

Stay tuned to the voice of an average story storytelling chimpanzee or login at http://panarrans.blogspot.com
                              
Good night Mon Ami and my fellow cousin ape.
                           
  
                

                  












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Another great educator and a teacher that I am aware of is Professor Subhashish Chattopadhyay in Bangalore, India.

While I narrate stories, Professor Subhashish an electronic engineer and a former professor at BARC, does and teaches real mathematics and physics.

He started the participation of Indian students at the International Physics Olympiad.

Do visit him here:


All his books can be downloaded for free through this link:


For edutainment and English education of your children, I recommend this large collection of Halloween Songs for Kids:



Monday, July 29, 2019


July 29, 2019 Monday

Bedtime Story 


Missing Intermediates Allows Taxonomy


Tonight we shall continue with Dawkins’ exposition on speciesism:

“Humans are nowadays not supposed to be anybody’s property, yet the rationale for discriminating against chimpanzees is seldom spelled out, and I doubt if there is a defensible rationale at all.

Such is the breathtaking speciesism of our Christian-inspired attitudes, the abortion of a single human zygote (most of them are destined to be spontaneously aborted anyway) can arouse more moral solicitude and righteous indignation than the vivisection of any number of intelligent adult chimpanzees!

The only reason we can be comfortable with such a double standard is that the intermediates between human and chimps are all dead.”

It is indeed true that the absence of both the “transitional forms” fossils and absence of living intermediates of so many existing species has shaped our world view and has saddled our cranial vaults with “discontinuous minds” thereby allowing us readily to classify the living world – even if not totally satisfactorily – but at least conveniently into neat taxonomical tables.

Such neat pseudo distinctions then allows one to built further hypotheses that are in discordance with the reality of the complexities of life forms.

Today, perhaps unknownst to most, the system of classification of the living world and its taxonomy that is being followed is not that of Carl Linnaeus – the Swedish botanist but that of currently living British Evolutionary Biologist who is Professor at the Department of Zoology at the University of Oxford Thomas Cavalier-Smith.

Carl Linnaeus had divided the natural world into three kingdoms (the second highest taxonomic rank just below domain and followed by smaller groups called phyla): animal, vegetable and mineral.  

Modern evolutionary biologists are more comfortable with just two kingdoms: animal kingdom and plant kingdom.

Cavalier-Smith on the other hand did not find this satisfactory enough and has divided all life forms into eight kingdoms:

Plantae

Animalia – multicellular eukaryotes

Protozoa – single celled eukaryotes

Fungi -

Eubacteria - prokaryotes

Archaebacteria – single celled prokaryotes without nucleus

Chromista – all algae with chlorophylls and which most biologists earlier would have placed them under plantae

Archezoa – eukaryotes that diverged before the origin of mitochondria

Even this classification is not universally recognized to its complete totality and yet taxonomy is possible because of absence of intermediates between various life forms.       

Stay tuned to the voice of an average story storytelling chimpanzee or login at http://panarrans.blogspot.com
                              
Good night Mon Ami and my fellow cousin ape.
                           
  
                

                  












Advertisements

Another great educator and a teacher that I am aware of is Professor Subhashish Chattopadhyay in Bangalore, India.

While I narrate stories, Professor Subhashish an electronic engineer and a former professor at BARC, does and teaches real mathematics and physics.

He started the participation of Indian students at the International Physics Olympiad.

Do visit him here:


All his books can be downloaded for free through this link:


For edutainment and English education of your children, I recommend this large collection of Halloween Songs for Kids:



Sunday, July 28, 2019


July 28, 2019 Sunday

Bedtime Story 


Creating Gaps


Let us consider a specific case of us apes and one or two “transitional forms” fossils that have been found and then I shall enlighten the problem of gaps that is conjured out of thin air by True-Believers which never exists in the first place.

Consider the fossil that was discovered by Donald Johanson in 1973 in Eastern Africa which is calculated to be about 3.2 million years old.

It has been classified by the taxonomists under the order Primate and family Hominidae.

The specimen is regarded to be ancestral to the genus Homo and transitional between ancestral apes and humans and has been classified under the genus Australopithecus.

Then there are fossils which very much resemble to those of Australopithecus but with the brain size 20% larger and possessing a different kind of dentition.

The fossils were also associated with tool making and hence it was placed in the genus Homo and species habilis.

Homo habilis is a strong candidate for the earliest pre human/human species though of course it is debatable who should be placed under the genus homo and who not or which specimen should be treated as the earliest human ape.

Yet whatever said and done there is a definite gradient of change from Australopithecus to Homo habilis with the later resembling modern human apes more than the former.

Yet this will not satisfy the True-Believer for he will raise the problem of gap and demand the missing link between the two.

Just imagine for sake of argument that some paleontologist does find fossilized remains of crushed skull that falls something in between these two species of extinct ape creatures.

In that case the true Believers will demand not for one but for two missing links and thereby much to their delight the problem of gaps will not only persist but be exaggerated. 

But it is natural that we will never have the complete gradient of fossils displaying slow and gradual changes that we would desire to and these gaps will have to be necessarily filled up creatively either through the help of artists or even better using computer imagery and algorithms.            

Dawkins asserts that such a large absentee of various life forms in our contemporary earth saves not only the field of zoological taxonomy from awkward ambiguity but also human ethics and law.

This allows for our “discontinuous minds” to neatly classify the living world into units and compartmentalize them into discontinuous species which is very convenient for everybody.

Let me quote the way Dawkins enlightens this point:

“The director of a zoo in entitled to “put down” a chimpanzee that is surplus to requirements, while any suggestion that he might be “put down” a redundant keeper or ticket-seller would be greeted with howls of incredulous outrage.

The chimpanzee is the property of the zoo.”

Stay tuned to the voice of an average story storytelling chimpanzee or login at http://panarrans.blogspot.com
                              
Good night Mon Ami and my fellow cousin ape.
                           
  
                

                  












Advertisements

Another great educator and a teacher that I am aware of is Professor Subhashish Chattopadhyay in Bangalore, India.

While I narrate stories, Professor Subhashish an electronic engineer and a former professor at BARC, does and teaches real mathematics and physics.

He started the participation of Indian students at the International Physics Olympiad.

Do visit him here:


All his books can be downloaded for free through this link:


For edutainment and English education of your children, I recommend this large collection of Halloween Songs for Kids:




Saturday, July 27, 2019


July 27, 2019 Saturday

Bedtime Story 


Fossilization and Missing Links


Tonight we shall continue with the extract from the 1914 essay of Nathan Cobb titled “Nematodes and their Relationships” that he wrote for the Yearbook of the United States Department of Agriculture.

“The location of various plants and animals would still be decipherable, and, had we sufficient knowledge, in many cases even their species could be determined by examination of their erstwhile nematode parasites.” 

This is why in spite of their numerical predominance the soft-bodies organisms are rarely found in fossil forms which is dominated by molluscs, vertebrates, echinoderms (marine animals exhibiting radial symmetry such as starfishes) and the brachiopods (possessing hard “valves” or shells on their upper and lower surfaces).       
 
Having understood the process of fossilization it is therefore not surprising that the so called “intermediate forms” or the “missing links” between species that the True-Believers of all hue and colors seek or demand are physically absent in our midst.

And yet it is fairly easy to be deluded by one’s ignorance (and denial) and come to the false conclusion that “transitional forms” in the forms of fossils are absolutely lacking for I can provide you with a long list of them.

The “transitional forms” of fossils have been divided into categories that reflect their transitions from one class of organisms to other such as subphylum vertebrata, invertebrate, superclass agnatha, jawed vertebrates (gnathostomata), bony fishes or osteichthyes and so on.

The categories of “transitional forms” are as follows:

Invertebrate to vertebrate

Jawless fish to jawed vertebrae

Acanthodian to Shark

Primitive Jawed Fish to Bony Fish

Fish to Amphibian

Primitive to Modern Amphibians

Amphibian to Reptile

Early reptile to diapsid (group of amniote {land egg-laying} tetrapods)

Early diapsid to turtle

Early synapsid (possess temporal fenestra behind each eye orbit) to mammal

Dinosaur to Bird

Primates

Non-human primate to human

The fact is that even though plenty of fossils of “transitional forms” have been discovered to the mind of a True-Believer they will always be insufficient and inconclusive.

Can you guess why?

The answer is the pseudo problem of gaps in the fossil record so beloved of True-Believers.

Stay tuned to the voice of an average story storytelling chimpanzee or login at http://panarrans.blogspot.com
                              
Good night Mon Ami and my fellow cousin ape.
                           
  
                

                  












Advertisements

Another great educator and a teacher that I am aware of is Professor Subhashish Chattopadhyay in Bangalore, India.

While I narrate stories, Professor Subhashish an electronic engineer and a former professor at BARC, does and teaches real mathematics and physics.

He started the participation of Indian students at the International Physics Olympiad.

Do visit him here:


All his books can be downloaded for free through this link:


For edutainment and English education of your children, I recommend this large collection of Halloween Songs for Kids:



Friday, July 26, 2019


July 26, 2019 Friday

Bedtime Story 


Soft-Bodied Organisms Have Little Hope of Leaving Behind Fossil Records


You can very well summarize from the last night’s story that the process of fossilization is highly skewed towards organisms with hard-parts.

This leaves nearly entire groups of soft-bodied organisms with little chance of getting geologically and paleontologically documented as fossils.

One must not under-estimate the biological importance and weightage the soft-bodied animals carry with them (and they do so quite literally).

In terms of the animal biomass currently living on planet Earth the soft-bodied animals overwhelmingly outweigh the hard-bodied ones with their net weight being at least double and possibly more than those of hard-bodied ones.

The chief reason for this being the sheer magnitude of round worms or the nematodes that are thriving on planet earth (Caenorhabditis elegans – the model organism is also a nematode).

They have adapted themselves to each and every ecosystem found on this planet including the floor of the ocean where they represent 90% of its population.

Nematodes today occupy complete and total numerical dominance of planet Earth with its population density often exceeding a million individuals per square meter and comprising 80% of all individual animals on earth. 

A subset of roundworms along with tapeworms and flukes together form a special group of macroscopic parasitic organisms known as helminths.

The term “helminth” is in a way artificial as there is no consensus on their taxonomy nor have they any special evolutionary link between them.

What joins them together is their medical significance to the species of human apes as of the 1 million estimated species of helminth around 300,000 are known to parasite vertebrates (many of them feed us and toil relentlessly for us) out of which at least 300 infect humans alone.

Helminthiasis has been labeled as one among the several neglected tropical diseases (NTDs) which again is a relative term.

NTDs have been getting lesser attention and therefore sparser funding for research, distribution and treatment in comparison to the big three infectious diseases namely HIV/AIDS, tuberculosis and malaria.     

Nathan Cobb of Baltimore, Maryland who is known as “the father of nematology in the United States” has this to say about the nematodes or the round worms:

“In short, if all the matter in the universe except the nematodes were swept away, our world would still be dimly recognizable, and if, as disembodies spirits, we could then investigate it, we should find its mountains, hills, vales, rivers, lakes, and oceans represented by a film of nematodes. 

The location of towns would be decipherable, since for every massing of human beings there would be a corresponding massing of certain nematodes.

Trees would still stand in ghostly rows representing our streets and highways…”

Stay tuned to the voice of an average story storytelling chimpanzee or login at http://panarrans.blogspot.com
                              
Good night Mon Ami and my fellow cousin ape.
                           
  
                

                  












Advertisements

Another great educator and a teacher that I am aware of is Professor Subhashish Chattopadhyay in Bangalore, India.

While I narrate stories, Professor Subhashish an electronic engineer and a former professor at BARC, does and teaches real mathematics and physics.

He started the participation of Indian students at the International Physics Olympiad.

Do visit him here:


All his books can be downloaded for free through this link:


For edutainment and English education of your children, I recommend this large collection of Halloween Songs for Kids:



Thursday, July 25, 2019


July 25, 2019 Thursday

Bedtime Story 


Why "Transitional Forms" Are So Rare and Few


The sisters of my mother (there are five of them alive) would also be “transitional forms” between me and my grandmother as they also carry the shared traits of mine and my grandmother’s.   

And yet even though my mother and her sisters are “transitional forms” between my grandmother and me as an individual they are not meaningful in the way we wish to assign meaning to it in this three-generational span.

Remember this is a very difficult concept for our brains to get around to as it is not used to dealing with such large spans of geological times where evolutionary changes become meaningful and show their impact (except in microbiology and medicine where we keep observing the phenomenon of microbial drug resistance).

The true-Believers or the creationists have so badly failed to grasp this concept (I have a feeling that they sincerely do not have any intention to understand anything that goes against their fundamental religious axioms) that they expect the intermediate forms to be either half-way between two species, or “partially formed” or “incomplete” creatures.

Their favorite question “where is the missing link between human apes and the other great apes?” not only shows their ignorance but reflects the inherent difficulty of the concept of “intermediate forms” or “transitional forms”.    

They probably expect a mythical creature like a Greek Minotaur which is a mosaic of a bull and a man because it is their core belief that God can create whatever he wants but that sadly is not the case with the mechanism of evolution by natural selection.  

Nature cannot go back to the drawing board and start from a blank slate; it has to tinker with the existing biological models or forms.
 
It is a well known fact that more than 99% of all species (the total is roughly estimated to be about five billion of which the “lucky ones” to be currently alive being around 14 million and out of which a mere 1.2 million have been documented and 86% remaining out of our knowledge) that have ever lived on this planet have died out and become extinct.          

Cataclysmic extinctions (apart from gradual background extinctions) are a recurrent theme in our evolutionary history that wipe out a vast segment of existing species and are a necessary and integral part of the Darwinian theory of evolution. 

Yet the traces of most of the extinctions are lost from the annals of evolutionary history simply because the likelihood of even bones or any hard part of organisms becoming fossilized is very low.

Even in the best of circumstances rarely do organisms end up getting fossilized.

This is so because fossilization requires a series of complex chemical and geological mechanisms such as permineralization (empty spaces getting filled in with mineral rich ground water), casting and molding, replacement and recrystallization, adpression, carbonization, bioimmuration among others.

These processes are so highly exacting in terms of paleontological and geological requirements that fossilization of most organisms becomes an extremely speculative affair.  

Stay tuned to the voice of an average story storytelling chimpanzee or login at http://panarrans.blogspot.com
                              
Good night Mon Ami and my fellow cousin ape.
                           
  
                

                  












Advertisements

Another great educator and a teacher that I am aware of is Professor Subhashish Chattopadhyay in Bangalore, India.

While I narrate stories, Professor Subhashish an electronic engineer and a former professor at BARC, does and teaches real mathematics and physics.

He started the participation of Indian students at the International Physics Olympiad.

Do visit him here:


All his books can be downloaded for free through this link:


For edutainment and English education of your children, I recommend this large collection of Halloween Songs for Kids: